Incident Library
  • Root cause
  • Component
  • Symptom
  • Contributing factor
  • Case

Cases19 cases

6 to 10 of 19

  1. Symptoms

    At 09:36 on 18 March 2025, during the upgrade of the live cluster to EKS 1.30, users reported that their pods were being terminated and were not restarting automatically, in both production and non-production environments. Automated infrastructure alerts fired as well, and production services had outages.

    Trigger

    Upgrading the live EKS cluster from 1.29 to 1.30, during which the descheduler attempted to reschedule all pods on the cordoned nodes simultaneously.

    Root cause
    Component
    Contributing factor
    Detection

    Users reported at 09:36 that pods were being terminated and not restarting, and automated infrastructure alerts fired.

    Remediation
    • Removed the cordon annotation so pods could be rescheduled
    • Deleted stuck 1.30 nodes to force their recreation
    • Added a new node group of 20 nodes running 1.30 by hand
    • Cordoned and drained all old 1.29 nodes onto the new 1.30 nodes
    Action items
    • Raise an AWS Production System Down support case (Case ID: 174229643100496)
    • Get guidance from AWS support on querying control-plane logs to find the root cause of similar issues
    • Document a runbook for emergency scaling of a new node group in case of unexpected capacity shortages
    • Alert on an imbalance between the autoscaling group and the Kubernetes nodes
    • Review the descheduler configuration to understand why it throws pods off cordoned nodes, and fix it where possible
    • Alert on spikes in the pending pod count
    Lessons

    The write-up lists review actions rather than lessons. They show the team had no documented way to add an emergency node group, no alert on a mismatch between the autoscaling group and the nodes Kubernetes sees, no alert on a spike in pending pods, and no clear understanding of how the descheduler treats cordoned nodes.

  2. Symptoms

    Kibana stopped showing new application logs at 13:45. At 14:27 a user told the Cloud Platform team in the #ask-cloud-platform channel that Kibana had received no logs since then.

    Trigger

    OpenSearch ran out of disk space and index writes were blocked.

    Root cause
    Component
    Contributing factor
    Detection

    A user reported in #ask-cloud-platform at 14:27 that Kibana had received no logs since 13:45. The report records 12:10, when the ClusterIndexWritesBlocked alert first fired, as the first detection.

    Remediation
    • restarted all fluent-bit containers (logs flowed for a few minutes, then the error came back)
    • increased OpenSearch disk space from 8000 to 12000
    • configured fluent-bit to stop sending logs to OpenSearch while the root cause was investigated
    Action items
    • Look into index dating issues in OpenSearch and Elasticsearch
    • Add high-priority alerts for Elasticsearch and OpenSearch
    • Re-introduce OpenSearch into live logging
    • Investigate the fluent-bit "failed to flush chunk" error
  3. Symptoms

    A production EKS cluster on Kubernetes 1.30 went into read-only mode: the API server rejected every request that would change an object, such as creating pods or scaling deployments, and deleting objects to free space did not work either.

    Trigger

    Kyverno 1.12 kept creating ephemeralreports objects that piled up in etcd until the database passed EKS's size limit.

    Root cause
    Component
    Contributing factor
    Detection

    The cluster rejected writes; the audit logs carried the "etcdserver: mvcc: database space exceeded" error.

    Remediation
    • AWS raised the etcd storage limit from 8/10GB to 12GB to unlock writes
    • an AWS engineer deleted the leaked Kyverno ephemeralreports objects directly from etcd
    Action items
    • Monitor the etcd database size with apiserver_storage_size_bytes and never let it reach 8GB
    • Upgrade Kyverno 1.12 to 1.12.4, which fixes the ephemeralreports pile-up, or disable reporting for admission events and tune --aggregationWorkers
    Lessons

    On EKS, once etcd hits its size limit the cluster becomes read-only and only AWS can clean it up, so cleanup scripts must run before the limit is reached. Watch the etcd database size and object counts per resource, especially for controllers that create report objects.

  4. Symptoms

    On 5 October 2023 in us-central1, newly created VMs waited a long time before their networking worked, and VMs that had been live migrated lost connectivity for a long time after the migration. Networking telemetry showed cross-region packet loss to and from us-central1 from 03:08 US/Pacific. Health check state of VMs reached load balancers late.

    Trigger

    A management plane behaviour change, meant to decouple the processing of API updates to Instance Groups and Network Endpoint Groups used as load balancer backends, was deployed in us-central1 after rolling out to several other regions without incident.

    Root cause
    Component
    Contributing factor
    Detection

    Engineers were alerted to slowness in the virtual network control plane in us-central1 at 21:45 US/Pacific on 4 October, before the packet loss started, and to controller failures from memory exhaustion at 02:11 on 5 October. Networking telemetry showed cross-region packet loss from 03:08.

    Remediation
    • Increased the memory allocated to the virtual network router controllers
    • Rolled back the management plane change in us-central1
    • Restarted by hand the routers that were still not accepting updates
    Action items
    • Alert proactively on memory risks and unexpected memory increases
    • Refactor the deployment configuration so engineers can reallocate memory much faster
    • Re-evaluate existing practices and add safety mechanisms for API reconciliation
    • Make management plane changes more visible across teams so the changes can be correlated faster
    • Adjust the deployment footprint so a regional API change is less likely to exhaust memory across the region at once
    • Optimise memory use in the traffic routers and their controllers
  5. Symptoms

    At 13:42 the RootVolUtilisation-Critical alert fired in the high-priority alerts channel. At 14:03 a user reported image pull errors with the message "no space left on device".

    Trigger

    Upgrading the EKS Terraform module to version 18, which changed the node launch template, and draining workloads onto the new nodes it created.

    Root cause
    Component
    Contributing factor
    Detection

    The RootVolUtilisation-Critical alert fired in the high-priority alerts channel at 13:42, and a user reported "no space left on device" image pull errors at 14:03.

    Remediation
    • Uncordoned the old default node group and drained the new nodes to move workloads back
    • Identified the launch template change that cut the root volume to 20 GB and applied a fix on the manager and live clusters
    • Drained the old node group onto the fixed nodes
    Action items
    • Update the runbook to compare launch template changes during an EKS module upgrade
    • Create a test setup that pulls images of different sizes, like live
    • Update the RootVolUtilisation alert runbook to check the disk space configuration
    • Scale CoreDNS dynamically based on the number of nodes
    • Investigate whether IPv6 can solve the IP prefix starvation problem
    • Add drift testing to identify when a terraform plan shows a change to the launch template
    • Set up logging for the CNI and ipamd logs and alerts on errors related to IP prefix starvation
    Lessons

    The write-up lists review actions rather than lessons. They aim at two gaps: the launch template changes brought by a module upgrade were not compared or drift-tested before rollout, and there were no CNI or ipamd logs or alerts to show the IP prefix starvation the team suspected during the drain.

Check your cluster for this

These 19 cases involve Node pool and JupyterHub. kubegap audits a Kubernetes cluster for gaps like these, read-only, from Claude Code or Codex; its checks cite public reports like the ones in this library.

By root cause6

Dependency failure1 case

Organisation
  1. IL-0133 A storm shut down cooling at Nebius's us-central1 data center, and a disk hot-plug bug kept Managed Kubernetes control planes down for hours after power returned
    Nebius2026

Configuration change3 cases

  1. IL-0246 New pods on Adyen's big data Kubernetes nodes could not start, failing with "Cilium API client timeout exceeded"
    Adyen2026
  2. IL-0019 An EKS Terraform module upgrade shrank node root disks from 100 GB to 20 GB and image pulls failed with no space left on device
  3. IL-0035 Worker nodes went NotReady after a new ElastAlert rule without memory limits used up node memory
    NU.nl2019

Capacity exhaustion9 cases

  1. IL-0470 Buildkite notifications were delayed after Prometheus storage filled and EKS notification workers could not autoscale
  2. IL-0465 IONOS Container Registry image pushes and pulls failed with 504 Gateway Timeout
  3. IL-0100 PostHog's feature flags pods were packed onto Kubernetes nodes that were too small for their CPU requests, and CPU saturation above 90% caused three outages in ten days through Redis overload, connection pool exhaustion and slow queries
  4. IL-0042 Application logs stopped reaching Elasticsearch and OpenSearch for hours and were lost when OpenSearch ran out of disk space
  5. IL-0043 Application logs missing in Kibana after a newer Fluent Bit version changed its chunk drop strategy
  6. IL-0016 Prometheus on the live cluster ran out of memory and was OOMKilled, and the monitoring node it ran on went NotReady
  7. IL-0500 UToronto JupyterHub logins and server starts returned 500 errors when the hub's sqlite database disk filled up
    2i2c2022
  8. IL-0013 The conntrack table filled up on downsized GKE nodes and a high-traffic aggregation proxy saw climbing connection resets
  9. IL-0503 mybinder.org launches failed after a GKE node ran out of memory and its nginx-ingress proxy pod crash-looped

Faulty deployment3 cases

  1. IL-0020 During an EKS 1.30 upgrade the descheduler tried to reschedule every pod on the cordoned nodes at once and production workloads went down
  2. IL-0530 Virtual router controllers in us-central1 ran out of memory in a loop, cutting networking for new and migrated VMs
  3. IL-0467 Boskos crash-looped after a node drain started it from a buggy StatefulSet image, failing Kubernetes PR jobs for 9 hours

Software defect2 cases

  1. IL-0077 EKS cluster went read-only for over seven hours after Kyverno ephemeralreports filled the etcd database past its size limit
  2. IL-0504 mybinder.org launches failed for about five hours as undeleted user pods piled up and filled the cluster

Certificate or credential expiry1 case

Organisation
  1. IL-0184 JupyterHub's KubeSpawner could not create containers and kubectl was refused because the API server and other internal certificates of a kubeadm cluster had expired
    dbhang2021