Cases2 cases

1 to 2 of 2

1. IL-0059 Single-master Kubernetes control plane kept dying because the kubelet restarted a healthy etcd on a failing kubeadm liveness probe

   NRE Labs2018

   Symptoms

   The daily NRE Labs statistics showed lesson activity collapsing, and kubectl could not reach the cluster: `The connection to the server 1.2.3.4:6443 was refused - did you specify the right host or port?`

   Control plane unresponsiveProbe failuresService outage

   Trigger

   Unknown. The liveness probe that kubeadm writes into the etcd static pod manifest (an `etcdctl get foo` against 127.0.0.1:2379, failureThreshold 8, timeoutSeconds 15) started failing. The author first suspected GCP maintenance the night before, but could not reproduce the probe failure by hand and does not know why it began.

   Root cause

   unknown

   Component

   etcdkubeletKubernetes API server

   Contributing factor

   Single point of failureUnreviewed defaultsHarmful manual actionIgnored early signalMonitoring blind spot

   Detection

   The author saw lesson activity drop in the daily NRE Labs statistics during his morning routine.

   Remediation

   • removed the liveness probe section from the kubeadm-generated etcd static pod manifest and applied it between etcd restarts

   Action items

   • Add monitoring, especially for the single-node master
   • Run a basic "down for maintenance" page in Google Cloud Functions that points to Twitter for updates, to redirect to during outages

   Lessons

   Because all of the infrastructure is managed as code, the cluster could be rebuilt quickly, but destroying it before finding the cause also destroyed the evidence. Monitoring matters, especially with a single-node master. Read the restart counts in kubectl output, not just the Running status. Remember the fundamentals instead of expecting the issue to be more complicated than it is, and do not let the urgency of an outage push you into hasty decisions. Put up a maintenance page instead of leaving the site failing halfway.

   View case
2. IL-0503 mybinder.org launches failed after a GKE node ran out of memory and its nginx-ingress proxy pod crash-looped

   Binder Project2017

   Symptoms

   On 30 November 2017 at 16:59 PST, mybinder.org operators noticed that Grafana looked wrong and that launching a new server failed with an error that a temporary user could not be created. Pods that were already running kept running, but no new ones were being created.

   Service outageContainer crash loopProbe failuresOOMKilled

   Trigger

   A build container, which ran without a memory limit, most likely used up all the memory on the node that ran the proxy pod.

   Root cause

   Capacity exhaustion

   Component

   Ingress controllerContainer memory limitJupyterHub

   Contributing factor

   No resource requests or limitsHarmful manual actionNo alert on limit

   Detection

   An operator happened to look at Grafana at 16:59 PST, saw that it looked wrong, and confirmed the error by launching a new server.

   Remediation

   • Cordoned the node that had run out of memory
   • Uncordoned the node once the proxy was working

   Action items

   • Limit the memory available to build pods
   • Change the JupyterHub configuration so user pods are not cleaned up when the jupyterhub pod restarts
   • Nominate one person to drive the response, possibly in a shared terminal, so only one person changes the cluster
   • Alert when something is wrong with the cluster, for example by counting 4xx responses on the jupyterhub pod

   View case

By root cause2