Cases17 cases

1 to 5 of 17

1. IL-0071 Worker node running out of inodes while disk space looked fine, because containerd kept a full node_modules tree in each of several image layer snapshots

   Onkar Raghunath Shelke2026

   Symptoms

   A Kubernetes worker node paged with NodeFilesystemFilesFillingUp, the node_exporter mixin alert that predicts a filesystem will run out of inodes. The engineer checked disk space first: df -h showed the root filesystem 83% used, 103G used and 22G available. df -i showed inodes 67% used, 11M used and 5.3M free.

   Node disk full

   Trigger

   Several versions of a single-stage Node.js image, each shipping more than 40,000 files, were held on the node; containerd unpacked every layer with a distinct digest into its own snapshot, each with a full copy of node_modules.

   Root cause

   Capacity exhaustion

   Component

   Node root diskkubeletContainer runtime

   Contributing factor

   Unreviewed defaultsMonitoring blind spotUnknown limit

   Detection

   The NodeFilesystemFilesFillingUp alert from the node_exporter mixin fired on the predicted inode trend while inode use was at 67%.

   Action items

   • Build the image in multiple stages so the final image contains only the compiled assets
   • Add a flat alert on root filesystem inode use above 80% for 30 minutes alongside the predictive alert
   • Put a Prometheus query on a dashboard that shows, per node, inode usage minus disk usage, sorted from the highest
   • Remove unused images from nodes with crictl rmi --prune to free old snapshots

   Lessons

   kubelet's background cleanup works on bytes only. A workload heavy in small files gets no early intervention for inodes, and the first thing kubelet does at 5% free inodes is evict pods. Watch inode use on nodes separately from disk use, and keep dependency trees out of runtime images.

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2. IL-0048 DNS lookups timed out in a large EKS cluster when CoreDNS hit the 1024 packets-per-second link-local limit, driven by sudo hostname lookups

   unknown2025

   Symptoms

   CI jobs failed now and then because a hostname could not be resolved. The failures came from tensorstore, appeared on several different instances and did not repeat consistently. The error read: "./tensorstore/util/result.h:420: Status not ok: status(): UNAVAILABLE: CURL error Could not resolve hostname: Could not resolve host: company-bucket.s3.amazonaws.com".

   DNS resolution failuresIntermittent timeouts

   Trigger

   An administrative pod running with host networking called sudo in a loop. Each sudo call looked up the node's own hostname, and with ndots:5 and four search domains every lookup became five queries, for both A and AAAA records.

   Root cause

   Capacity exhaustion

   Component

   CoreDNSClient-side DNS resolver and cacheVPC DNS resolver

   Contributing factor

   Unknown limitUnreviewed defaults

   Detection

   Reports of flaky CI jobs that could not resolve an S3 bucket hostname, followed by i/o timeout errors in the CoreDNS logs.

   Remediation

   • added 'Defaults !fqdn' in /etc/sudoers.d/00-no-fqdn (mode 440) to the container image so sudo stopped looking up the hostname

   Lessons

   Traffic from CoreDNS to the VPC DNS resolver is limited to 1024 packets per second per interface, and drops show up only as UDP timeouts; the linklocal_allowance_exceeded counter in ethtool shows them. Names that are not fully qualified are multiplied by the search domains under ndots:5, and AAAA lookups double them again. sudo looks up the host's own name on every call unless 'Defaults !fqdn' is set.

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3. IL-0006 VPC subnets ran out of IP addresses because the AWS VPC CNI kept IPs on full nodes, and WARM_IP_TARGET changes then blocked pod starts after every pod deletion

   Neon2025

   Symptoms

   On 16 May 2025, in Neon's Kubernetes cluster in AWS us-east-1, new compute pods were scheduled but could not start and failed with IP allocation errors. Each Neon compute is a Postgres database running in a lightweight virtual machine in its own pod, so without new pods, idle customer databases could not be woken up.

   IP address exhaustionPods Pending

   Trigger

   On 16 May the Neon control plane's periodic job that terminates idle computes started failing. Compute creations continued, and the number of active computes rose from about 5k to about 8.1k within minutes. On 19 May, a follow-up change that set WARM_IP_TARGET back to 1 started the second round of failures.

   Root cause

   Capacity exhaustion

   Component

   AWS VPC CNIVPC subnet or pod address rangeCluster autoscaler

   Contributing factor

   Unreviewed defaultsNo capacity planningUnverified assumptionHarmful manual actionIneffective rollbackRetry storm

   Detection

   As cluster-autoscaler added nodes, the team saw IP allocation errors on new pods that were scheduled but could not start. The rate of successful pod starts and VPC subnet metrics were then used to follow the problem.

   Remediation

   • Set WARM_IP_TARGET=1 to release IPs held by nodes without free CPU or memory
   • Fixed the control plane's periodic job so idle computes were terminated again
   • Restarted the aws-node DaemonSet several times, each with a temporary improvement
   • Set WARM_IP_TARGET=0, MINIMUM_IP_TARGET=0 and WARM_ENI_TARGET=0, which let nodes allocate enough IPs and stabilised the cluster
   • On 19 May, set WARM_IP_TARGET back to 0 after setting it to 1 failed again
   • Enlarged the pool of pre-created warm compute pods to absorb failed pod starts

   Action items

   • Open a pull request to AWS CNI to improve how ipamd releases IPs in this situation
   • Follow up with AWS Support about the roughly 100 subnet IPs that were never allocated, for reasons Neon could not explain
   • Change the architecture to support horizontal scaling

   Lessons

   With default settings AWS CNI can keep many IPs on nodes that cannot use them, so the share of subnet IPs assigned to pods does not tell how close the subnet is to running out. WARM_IP_TARGET and WARM_ENI_TARGET follow different logic, a warm IP target of zero switches to the ENI logic, and IPs in cooldown count toward the target, which behaves badly under high pod churn. Changing these settings during an incident without knowing that logic prolonged the outage, and reverting a setting did not bring back the earlier healthy state.

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4. IL-0170 During a Lunar New Year event, traffic more than three times normal filled the nf_conntrack table on the EKS node running the Istio ingress gateway, dropping packets and taking down Backpackr's web and app services

   Backpackr2025

   Symptoms

   During a Lunar New Year event in January 2024, a developer posted a message in Slack suspecting an outage. While several people were checking it, the problem grew into a full outage of Backpackr's web and app services, and the company decided to stop the event.

   Service outage

   Trigger

   An unexpected traffic surge, more than three times normal, during the Lunar New Year event in January 2024.

   Root cause

   Capacity exhaustion

   Component

   conntrack tableIngress controllerIstio

   Contributing factor

   Single point of failureUnreviewed defaultsMonitoring blind spot

   Detection

   A developer reported a suspected outage in Slack; the outage became total while several people were still confirming it.

   Remediation

   • stopped the Lunar New Year event

   Action items

   • Raise net.netfilter.nf_conntrack_max on all nodes to memory bytes/16384/2, and three times that on Istio nodes, applied by the nodeOptimizer DaemonSet
   • Configure Istio mesh networking so sidecars communicate directly instead of through the ingressGateway
   • Upgrade the Istio nodes from c6.xlarge (12.5 Gbps) to n-type instances with up to 25 Gbps of network bandwidth
   • Strengthen monitoring with ENA network bandwidth and packet drops, detailed Istio ingressGateway and sidecar metrics, and CPU, memory and saturation

   Lessons

   When every request in a cluster goes through one ingress gateway node, that node's connection tracking table and network bandwidth set the limit for the whole service. The default nf_conntrack table size was too small for three times normal traffic, and once it filled, packets were dropped. After the outage Backpackr strengthened its monitoring of network bandwidth, packet drops and the Istio components.

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5. IL-0027 All CoreDNS pods landed on one node, the node ran out of memory, and DNS for the whole service went down

   Backpackr2025

   Symptoms

   Services on the production Amazon EKS cluster behind the idus marketplace threw intermittent errors whose cause was hard to pin down. Calls to external services such as RDS and Redis failed now and then, and whenever DNS traffic spiked, domain lookups answered slowly or failed outright.

   DNS resolution failuresIntermittent connection failuresHigh latencyOOMKilledService outage

   Trigger

   All CoreDNS pods were scheduled onto the same node, and that node's memory usage spiked until it ran out of memory.

   Root cause

   Capacity exhaustion

   Component

   CoreDNSClient-side DNS resolver and cachekubeletContainer memory limitNode pool

   Contributing factor

   Unreviewed defaultsSingle point of failureNo caching

   Detection

   The write-up does not say how the full outage was noticed. The earlier DNS trouble showed up as intermittent service errors, and investigating failed calls to RDS and Redis led to DNS resolution failures.

   Remediation

   • deployed NodeLocal DNSCache as a DaemonSet in front of CoreDNS
   • added a PodDisruptionBudget (maxUnavailable 1) and topologySpreadConstraints across zones for CoreDNS
   • lowered ndots from 5 to 2 with dnsConfig in the Deployments

   Lessons

   The CoreDNS setup that EKS creates by default (two pods) can be enough for a small or development cluster but becomes a bottleneck in a large production cluster, and DNS is a single point of failure that needs high availability and room to scale. Tuning the CoreDNS cache and buffer size only relieved the symptoms; the real load came from the extra queries that ndots:5 generates for external names. A CoreDNS pod without a memory limit can share a node's fate with everything else on it.

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