Cases8 cases
1 to 5 of 8
IL-0577Ficilcom's production Neon PostgreSQL database was reset by prisma migrate reset meant for the local databaseFicilcom2026- Symptoms
On the first working day after the Silver Week holidays, an engineer ran prisma migrate reset and then loaded seed data, intending to clean the local database before resuming work. The seed data did not seem to be there, and the engineer first suspected that the coding agent had skipped the step. The reset had in fact run against the production database.
- Trigger
The engineer ran prisma migrate reset believing it targeted the local database, while packages/database/.env still held the production DATABASE_URL left there from a production migration before the holidays.
- Root cause
- Component
- Contributing factor
- Detection
After the reset the engineer saw that the seed data did not seem to be present and realised the reset had hit production.
- Remediation
- Restored the production database with Neon's Backup & Restore
- Action items
- Make local scripts check DATABASE_URL and refuse to run destructive commands against anything but localhost or 127.0.0.1
- Stop writing production connection strings in local .env files
- Run production operations through CI or a secret manager
- Check local env files for production hosts such as *.neon.tech
- Check the Backup & Restore history window of the plan in use, and extend it or add separate backups if it is not enough
- Before holidays or long breaks, remove the production URL from local env files
- When stopping work midway, record how far it got in an issue or memo
- Add rules that forbid coding agents from running destructive database commands unless the user asks in the current message
- Lessons
Memory after a long holiday cannot be trusted, so the state of unfinished work has to be written down instead. A destructive command should refuse to run when its target is not clearly local. That a backup feature exists does not mean the plan's history window is long enough, and the damage was small this time only because the service happened to be at an early stage.
- Symptoms
About an hour after LootLocker cut over from a managed database provider to its own MySQL deployment on 2026-04-28, data anomalies showed up in production. A small window of writes made shortly before the migration, spanning 2026-04-19 to 2026-04-20, had never reached the new database, and the service stayed degraded for about three hours after the cutover.
- Trigger
On 2026-04-20 at about 16:20 BST, a routine credential rotation, made as part of an unrelated configuration fix, changed the credentials that the temporary replication process used for its database connection, and the process crashed.
- Root cause
- Component
- Contributing factor
- Detection
Data anomalies were detected in production at about 11:30 BST, about an hour after the cutover.
- Remediation
- Restored normal service behaviour first and deferred the root cause analysis
- Requested a restore of the deleted source database from the previous provider
- Replayed the affected records for impacted users from the restored source database
- Action items
- Perform technical changes of comparable risk in a scheduled maintenance window instead of as live cutovers
- Require a pre-cutover checklist that verifies replication or sync processes are live and caught up just before cutover
- Require an explicit downstream impact review for credential rotations of service accounts used by long-running processes
- Keep source systems until integrity in the target has been independently verified after cutover
- Publish planned maintenance and migration notices in the in-product News feed as well as Discord, with clear impact statements and more advance notice
- Lessons
The failure was a silent side effect of an unrelated change made eight days earlier: the replication process recovered and kept working, so there was no signal that data had been dropped, and a pre-cutover integrity check would have caught it. Deleting the source database before validating the new one made recovery much harder. Choosing a live migration to avoid downtime left no clean point to verify integrity, and the resulting degradation and two days of piecemeal recovery far exceeded what a short planned maintenance window would have cost. The announcement on Discord was not clear enough about the impact and came with too little notice.
IL-0286An exercise cleanup destroyed Honeycomb's Kafka brokers, leaving partitions leaderless and ingest crash-loopingHoneycomb2025- Symptoms
On 5 December, during the cleanup after a zonal failover exercise in production, Honeycomb destroyed Kafka brokers on purpose as a runbook step, and several topic partitions lost every broker that held them and became fully leaderless. Any Honeycomb team or environment whose assigned partitions were all unavailable could no longer have its data ingested.
- Trigger
During the cleanup that rebalances workloads after a successful zonal failover exercise, Honeycomb followed its runbook and destroyed Kafka brokers on purpose. Older, in-sync brokers were killed by accident, so some topic partitions lost every broker that held them.
- Root cause
- Component
- Contributing factor
- Detection
Responders noticed through the alerting noise that the ingest service Shepherd had gone into a crash loop more than an hour earlier. On Saturday morning they saw that the Kafka balancing jobs were not progressing and disk usage had not improved, and once the metadata topics were repaired, SLO processing triggers fired about ~18h of late data.
- Remediation
- Marked the impacted partitions read-only on the producer side, which stopped Shepherd's crash loop
- Ran partition reassignments to bring customers back to normal
- Turned off the Kafka autobalancer and left a manual reassignment plan running overnight
- Reduced local retention on Kafka to rely on S3 tiered storage for longer retention
- Repaired the broken _confluent-tier-state and __consumer_offsets partitions, which unblocked SLO processing
- Turned off ingest to stop the brokers from running out of disk
- Turned off tiered storage, which freed the broker disk space at once
- Reopened ingest, which ended the customer impact
- Truncated the fully damaged Retriever partitions and left them read-only
- Extended the binlog retention of the MySQL read-only replica because Activity Log could not publish to Kafka
- Patched Retriever so its nodes could idle live and serve old data despite broken offsets
- Made a one-time offset reset work in Retriever
- Evacuated to a new Kafka cluster with new topics and partitions
- Booted an Activity Log database instance from 9 December and replicated from it to limit data loss
- Cleaned up the older Kafka clusters
- Action items
- Consolidate internal documentation better as the company grows
- Lessons
Many elements of this outage were already known: similar outages, workaround plans, RFCs, migrations and procedures for running such exercises safely existed, but the documents were unknown outside their authors or hard to find. Flexible, locally controlled work is easy to defer again and again in favour of urgent work, and Honeycomb wants to notice when deferring becomes a reflex. Many key interventions came from people who no longer owned the components, which shows drift between team boundaries and the coupling inside the system. The pre-production clusters were too small to reproduce the flaw, and tests on a cluster closer to production would have made catching it much more likely. Coordination and public communication were also hard: senior engineers tended to take the lead automatically, and customers said the updates gave too much detail about minor beta features.
IL-0576Every dataset in CareNet's production BigQuery data warehouse was deleted, and UNDROP SCHEMA could not restore themCareNet2025- Symptoms
On a day in August 2025, at 10:41, CareNet's system development division posted a first report on Slack that a failure was occurring in BigQuery, the production data warehouse. At 11:47 the division's investigation found that the production datasets had been deleted by a service account belonging to the AI technology development team.
- Trigger
Test code that was being modified contained a step that resets test data by deleting a dataset and recreating it with the same name. Because of a configuration mistake, the step ran against production and deleted and recreated every production dataset.
- Root cause
- Component
- Contributing factor
- Detection
The system development division posted the first report of a BigQuery failure on Slack at 10:41, and its investigation found at 11:47 that the AI technology development team's service account had deleted the production datasets.
- Remediation
- Restored the tables one at a time with bq cp in Cloud Shell from BigQuery time travel, to a point before the incident
- Recreated views and table functions, which bq cp cannot restore, from the creation queries kept in BigQuery saved queries
- Action items
- Enforce controls so that test code cannot access the production environment
- Remove the excessive permissions granted to the service account
- Keep dataset and table information as managed metadata, because restoring with bq cp requires knowing the table names
- Keep the creation queries of views and table functions in a place such as GitHub, because bq cp cannot restore them
- Consider how BigQuery should be backed up
- Lessons
BigQuery time travel with bq cp recovered most of the data, but only because the table names were known, and it does not bring back views or table functions. Test code should not be able to reach production, and service accounts should not hold more permissions than they need.
- Symptoms
On 2 September 2025 the matrix.org homeserver went down at 17:45 UTC and stayed down until 18:00 UTC the next day. Both machines of its PostgreSQL cluster were out of action: the original primary had lost its RAID array during a disk expansion, and the data directory of the new primary had been deleted by mistake.
- Trigger
During maintenance to add drives, an existing drive disappeared from the primary database server's RAID 10 array at 11:17 UTC, which led to a failover and a rebuild of that server. The outage itself began when the data directory of the new primary on db-01 was deleted while clearing a failed restore on db-02.
- Root cause
- Component
- Contributing factor
- Detection
Monitoring fired when the drive disappeared from db-02's RAID array at 11:17 UTC, and Mythic Beasts confirmed the issue. The team realised it had deleted db-01's data directory, and the backend team was then paged, an incident was opened and an emergency was declared.
- Remediation
- Created a fresh RAID 10 array on db-02
- Unblocked WAL archiving from the new primary on db-01 to S3
- Started restoring db-02 from the S3 backups with wal-g
- Shut down Synapse and the damaged primary database
- Remounted the data partition of db-01 read-only
- Copied the WALs missing from S3 from db-01 to db-02
- Updated wal-g and patched it to continue from the partial restore
- Configured a restore_command wrapper that fetched WALs from S3 and the local files, and replayed them in standby mode
- Promoted db-02 to primary and restarted Synapse
- Ran backups against the primary while no replica existed
- Rebuilt db-01 as a replica from a base backup of db-02
- Action items
- Run pg_repack to reclaim free space
- Take incremental backups more often, since they restore faster than WAL replay
- Reduce Synapse's storage requirements
- Consider changing the terminal background colour by the database's role, for example by watching for the standby.signal file
- Consider wrapper scripts around sensitive commands, such as an alias for rm, and automating operations such as starting a base backup from primary to secondary
- Shorten the recovery time, with infrastructure from service providers
- Upgrade wal-g on all servers and repeat disaster recovery testing with it
- Explore ZFS local snapshots at the next hardware refresh
- Make status.matrix.org the source of truth during incidents and keep social media updated
- Lessons
Most of the difficulty came from the size of the database: restoring 51TB and replaying WALs took far longer than hoped, and incremental backups restore much faster than WAL replay. Running a destructive command on the wrong server was the turning point, and Matrix.org looks for better tooling and processes rather than blaming the individual; working as a trio did not catch the mistake, and server names that suggest a role caused confusion because a primary and a secondary swap roles. The recovery lost no data, but the recovery time needs to be shorter, and the wal-g versions on the disaster recovery server and the production servers had drifted apart.
These 8 cases involve Database and Database replication. kubegap audits a Kubernetes cluster for gaps like these, read-only, from Claude Code or Codex; its checks cite public reports like the ones in this library.
By root cause2
Operator error7 cases
- Component
- Contributing factor
IL-0577Ficilcom's production Neon PostgreSQL database was reset by prisma migrate reset meant for the local databaseFicilcom2026IL-0286An exercise cleanup destroyed Honeycomb's Kafka brokers, leaving partitions leaderless and ingest crash-loopingHoneycomb2025IL-0576Every dataset in CareNet's production BigQuery data warehouse was deleted, and UNDROP SCHEMA could not restore themCareNet2025IL-0242Both PostgreSQL servers behind matrix.org were lost during a disk expansion, and the homeserver was down for 24 hoursIL-0565Cookie Run: Kingdom's CockroachDB cluster failed when 16 of 24 nodes lost their filesystems, causing a 36-hour outageDevsisters2022IL-0332A test run against the production database truncated every table and travis-ci.com was down for about 5.5 hoursTravis CI2018IL-0506UC Berkeley DataHub logins failed and students got empty home directories after the JupyterHub database was overwrittenUC Berkeley2017
Certificate or credential expiry1 case
- Component
- Contributing factor
- Organisation