Cases12 cases

7 to 11 of 12

1. IL-0204 An etcd memory spike overloaded the control plane of a Render Frankfurt cluster, and DNS then failed because CoreDNS ran on the rebooted control plane nodes and could not start without the API server

   Render2024

   Symptoms

   In January 2022 an etcd memory spike overloaded the Kubernetes control plane of one of Render's clusters in Frankfurt. At first only operations that need the control plane failed: new deploys and cron job runs.

   Control plane unresponsiveDeploys failingDNS resolution failuresHigh error rate

   Trigger

   A memory spike in etcd overloaded the cluster's control plane.

   Root cause

   Capacity exhaustion

   Component

   etcdCoreDNSKubernetes API server

   Contributing factor

   Unreviewed defaultsHarmful manual action

   Action items

   • Run CoreDNS on data plane nodes instead of control plane nodes
   • Run etcd on dedicated nodes

   Lessons

   CoreDNS can keep answering from its in-memory cache while the API server is down, but it cannot initialise without it. With CoreDNS on the control plane nodes, a reboot or restart during a control plane outage turned a failure of deploys and cron jobs into a failure of requests to services that were already running. The core problem was that the data plane was not isolated enough from the control plane: even without the reboot, the etcd memory spike alone could have forced CoreDNS to restart.

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2. IL-0182 Too few CoreDNS replicas on EKS were overloaded during traffic spikes, raising latency and cutting the network for task pods, and the over-provisioned, tightly spread CoreDNS pods added later blocked Karpenter consolidation

   이언철2024

   Symptoms

   When traffic changed sharply, CoreDNS came under heavy load, and the cluster saw network problems and a sudden rise in latency. The horizontal pod autoscaler then added pods, database connections surged, and the impact spread to the whole service.

   High latencyIntermittent connection failuresAutoscaler misbehaviour

   Trigger

   Sharp changes in traffic loaded the small number of CoreDNS pods beyond what they could handle.

   Root cause

   Capacity exhaustion

   Component

   CoreDNSKarpenterHorizontal pod autoscalerPod scheduling and placement

   Contributing factor

   Automation amplificationHarmful manual action

   Remediation

   • Set up the Cluster Proportional Autoscaler for CoreDNS with nodesPerReplica and coresPerReplica chosen for the instance types in use
   • Spread CoreDNS with soft topologySpreadConstraints (ScheduleAnyway) instead of anti-affinity so Karpenter could consolidate nodes
   • Added alert thresholds on CoreDNS error rate, panics, request duration and request rate
   • Deployed NodeLocal DNSCache so each node answers DNS from a local cache and forwards misses to the main CoreDNS

   Lessons

   A fixed, small number of CoreDNS pods cannot follow a cluster whose nodes and pods change quickly with traffic, and the damage spreads: DNS latency triggers autoscaling, which in turn floods the database with connections. Simply adding many CoreDNS replicas created a different problem, because with tainted nodes and a maxSkew: 1 spread constraint the pods piled onto a few nodes and blocked Karpenter consolidation. Scaling CoreDNS in proportion to the cluster and putting a DNS cache on every node handled both.

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3. IL-0019 An EKS Terraform module upgrade shrank node root disks from 100 GB to 20 GB and image pulls failed with no space left on device

   UK Ministry of Justice2023

   Symptoms

   At 13:42 the RootVolUtilisation-Critical alert fired in the high-priority alerts channel. At 14:03 a user reported image pull errors with the message "no space left on device".

   Node disk fullImage pull failuresPod evictionPods stuck in ContainerCreatingIP address exhaustion

   Trigger

   Upgrading the EKS Terraform module to version 18, which changed the node launch template, and draining workloads onto the new nodes it created.

   Root cause

   Configuration change

   Component

   Node root diskNode launch templateNode poolAWS VPC CNICoreDNS

   Contributing factor

   Missed in reviewNo configuration testsNo alert on limit

   Detection

   The RootVolUtilisation-Critical alert fired in the high-priority alerts channel at 13:42, and a user reported "no space left on device" image pull errors at 14:03.

   Remediation

   • Uncordoned the old default node group and drained the new nodes to move workloads back
   • Identified the launch template change that cut the root volume to 20 GB and applied a fix on the manager and live clusters
   • Drained the old node group onto the fixed nodes

   Action items

   • Update the runbook to compare launch template changes during an EKS module upgrade
   • Create a test setup that pulls images of different sizes, like live
   • Update the RootVolUtilisation alert runbook to check the disk space configuration
   • Scale CoreDNS dynamically based on the number of nodes
   • Investigate whether IPv6 can solve the IP prefix starvation problem
   • Add drift testing to identify when a terraform plan shows a change to the launch template
   • Set up logging for the CNI and ipamd logs and alerts on errors related to IP prefix starvation

   Lessons

   The write-up lists review actions rather than lessons. They aim at two gaps: the launch template changes brought by a module upgrade were not compared or drift-tested before rollout, and there were no CNI or ipamd logs or alerts to show the IP prefix starvation the team suspected during the drain.

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4. IL-0083 Intermittent 5xx errors in a multi-tenant Kubernetes cluster came from internal DNS: the node-local dnsmasq hit its 150 concurrent query limit, did not cache cluster.local answers, and ndots search lookups flooded CoreDNS

   Adevinta2023

   Symptoms

   On a Friday afternoon a tenant of SCHIP, Adevinta's multi-tenant Kubernetes runtime, reported a spike of HTTP 5xx errors in some of its services. The drops in quality of service came back periodically through the following days, each one short, and were reported mostly around midnight.

   High error rateDNS resolution failuresHigh latency

   Root cause

   DNS or network fault

   Component

   CoreDNSClient-side DNS resolver and cacheTelemetry agent

   Contributing factor

   Unreviewed defaultsUnknown limitIgnored early signalUnverified assumption

   Detection

   A tenant reported a spike of HTTP 5xx errors in some of its services; the DNS Latency SLI had already been degraded for some time without being acted on.

   Remediation

   • raised the dnsmasq concurrent query limit from 150 to 1500
   • added a CoreDNS header block that sets the ra and aa flags and clears rd, so dnsmasq caches cluster.local answers
   • configured dnsmasq on each node to answer NXDOMAIN for unresolvable search-domain names instead of forwarding them to CoreDNS
   • changed the fluent-bit log router hostname to a fully qualified name
   • asked the affected tenants to use fully qualified names for internal calls

   Lessons

   The DNS Latency SLI had shown the problem long before anyone looked at it. An SLO only protects you when its SLIs are trusted and a drop is investigated. The investigation took a month partly because several on-call groups worked on it separately, without one place for observations and hypotheses, and sometimes chased hypotheses already discarded. Disprove one hypothesis before starting the next, and collect data the metrics system lacks: DNStop showed the garbage lookups that no dashboard did. With ndots:5, short service names multiply DNS traffic; a node-local cache only helps if it can cache the cluster DNS answers at all.

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5. IL-0049 Partial DNS outage after CoreDNS scaled down and kube-proxy failed to delete stale conntrack entries

   Preply2020

   Symptoms

   Prometheus detected a high rate of 5xx responses on three services, called A, B and C in the write-up, and paged the on-call engineers through VictorOps at 22:18 EET. The 5xx rate was also visible in Kibana.

   DNS resolution failuresHigh error rateStale endpoint routing

   Trigger

   Because load in the cluster was low, the CoreDNS autoscaler reduced the number of CoreDNS pods from 3 to 2.

   Root cause

   DNS or network fault

   Component

   CoreDNSkube-proxyconntrack table

   Contributing factor

   Automation amplificationIgnored early signalNo caching

   Detection

   Prometheus alerted on a high 5xx rate on services A, B and C and paged on-call through VictorOps.

   Remediation

   • reverted the latest release of the affected service
   • a regular deploy created new nodes, the CoreDNS autoscaler added CoreDNS pods, and the conntrack table was rewritten

   Action items

   • Disable the autoscaler for CoreDNS
   • Run a DNS cache server in production
   • Monitor conntrack usage

   Lessons

   Scaling CoreDNS down is not free: if kube-proxy fails to clear conntrack entries for the removed pod, clients keep sending DNS queries to it. Known DNS weaknesses in a cluster should be prioritised before they cause an outage, and fixes that only treat consequences leave the underlying conntrack problem in place.

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