Cases9 cases

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1. IL-0075 Kubernetes API servers pegged on CPU when the cluster grew to about 290 nodes, traced to Datadog agents polling the API

   Civis Analytics2019

   Symptoms

   After Civis released its new script infrastructure on Kubernetes internally in September 2018, developers reported that kubectl commands were slow, and users intermittently could not start notebooks and services.

   Control plane lagControl plane unresponsiveHigh latencyHigh error rateDNS resolution failures

   Trigger

   Migrating clients' Python, R and container scripts from the in-house Bocce system to Kubernetes (the project called Croquet) pushed the cluster to about 290 EC2 instances under a large script load.

   Root cause

   Capacity exhaustion

   Component

   Kubernetes API serverTelemetry agentetcd

   Contributing factor

   Unknown limitUnverified assumptionMonitoring blind spotNo capacity planning

   Detection

   Developer reports of slow kubectl commands and user reports of notebooks and services failing to start, then high CPU on the master nodes.

   Remediation

   • moved internal users back to the old Bocce infrastructure
   • resized the three master nodes from m4.large to m4.4xlarge
   • changed the Datadog setup so per-node agents no longer polled the API server for service metadata
   • raised max-requests-inflight for non-mutating requests from 400 to 1200
   • grew the etcd EBS volumes from 20 to 100 GB (100 to 300 IOPS)
   • switched client scripts from the ClusterFirst DNS policy to Default

   Action items

   • Upgrade etcd from 2.2.1 to 3.x once Kops supports a safe migration
   • Solve the in-cluster DNS timeouts so client scripts can talk to other workloads in the cluster

   Lessons

   Kubernetes can reach thousands of nodes only after tuning, and third-party DaemonSets are a common cause of control plane load: an agent on every node that polls or watches the API server multiplies with the cluster size. Datadog, kube2iam and the fluentd metadata filter all showed this. A small configuration change often fixes it, but finding it took load testing and the API server access logs.

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2. IL-0059 Single-master Kubernetes control plane kept dying because the kubelet restarted a healthy etcd on a failing kubeadm liveness probe

   NRE Labs2018

   Symptoms

   The daily NRE Labs statistics showed lesson activity collapsing, and kubectl could not reach the cluster: `The connection to the server 1.2.3.4:6443 was refused - did you specify the right host or port?`

   Control plane unresponsiveProbe failuresService outage

   Trigger

   Unknown. The liveness probe that kubeadm writes into the etcd static pod manifest (an `etcdctl get foo` against 127.0.0.1:2379, failureThreshold 8, timeoutSeconds 15) started failing. The author first suspected GCP maintenance the night before, but could not reproduce the probe failure by hand and does not know why it began.

   Root cause

   unknown

   Component

   etcdkubeletKubernetes API server

   Contributing factor

   Single point of failureUnreviewed defaultsHarmful manual actionIgnored early signalMonitoring blind spot

   Detection

   The author saw lesson activity drop in the daily NRE Labs statistics during his morning routine.

   Remediation

   • removed the liveness probe section from the kubeadm-generated etcd static pod manifest and applied it between etcd restarts

   Action items

   • Add monitoring, especially for the single-node master
   • Run a basic "down for maintenance" page in Google Cloud Functions that points to Twitter for updates, to redirect to during outages

   Lessons

   Because all of the infrastructure is managed as code, the cluster could be rebuilt quickly, but destroying it before finding the cause also destroyed the evidence. Monitoring matters, especially with a single-node master. Read the restart counts in kubectl output, not just the Running status. Remember the fundamentals instead of expecting the issue to be more complicated than it is, and do not let the urgency of an outage push you into hasty decisions. Put up a maintenance page instead of leaving the site failing halfway.

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3. IL-0003 linkerd lost Kubernetes service discovery after an etcd reconfiguration, and restarting every linkerd instance turned failed payments into a full platform outage

   Monzo2017

   Symptoms

   At 14:10 an engineer deployed a change to a service that Monzo's current account needs to process payments, and every request to that service started to fail. Current account customers saw payment failures; the prepaid card was not affected at first because it does not use that service. The change was rolled back at 14:12, but the errors continued.

   High error rateStale endpoint routingService outage

   Trigger

   At 14:10 an engineer deployed a change to a service needed to process current account payments. Two weeks earlier the etcd cluster had been upgraded and grown from three to nine nodes, and one day earlier another team had scaled a new service down to zero replicas while leaving its Kubernetes service in place.

   Root cause

   Software defect

   Component

   etcdKubernetes API serverLinkerdkubelet

   Contributing factor

   Ineffective rollbackHarmful manual actionOverlapping failuresMonitoring blind spotSingle point of failure

   Detection

   Payment failures began right after the 14:10 deploy. The team rolled back at 14:12 and declared an outage internally at 14:16. At 15:13, when no service could serve requests, practically all automated alerts fired.

   Remediation

   • Rolled back the payments service change (the errors continued)
   • Activated internal backup processes so most customers could still use their card
   • Restarted all linkerd instances (this made the outage worse)
   • Restarted the three Kubernetes API server processes so replacement linkerd instances could start
   • Began deploying a newer linkerd version with the fix for empty services
   • Deleted the Kubernetes service that had no endpoints, which let linkerd load service discovery again

   Action items

   • Fix the bug in Kubernetes that can trigger timeouts after a cluster reconfiguration
   • Roll out a new version of linkerd that fixes the parsing error
   • Create better health checks, dashboards and alerts for the affected components so they give clearer signals about what is wrong and prevent human error
   • Improve procedures to communicate outages internally and externally as clearly and quickly as possible

   Lessons

   A large failure in a distributed system can be very hard to understand, and well-meant human action can compound it, as restarting every linkerd instance did here by exposing a second incompatibility. Because Monzo deploys often and its network changes constantly, the deployment and request-routing systems have to be trustworthy. Monzo committed to publishing a similar post-mortem for any incident of this severity.

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