Cases35 cases

21 to 25 of 35

1. IL-0029 Slow user-facing services from CPU throttling on containers that used far less CPU than their limit

   Buffer2020

   Symptoms

   Services on Buffer's kops-managed cluster on AWS (about 60 nodes and 1500 containers) answered more slowly than they should have. The container throttling metric showed that many containers were being throttled whatever their CPU usage was, including containers that never came close to their CPU limit.

   CPU throttlingHigh latencyNode NotReady

   Trigger

   CPU limits on user-facing services, enforced through CFS quota by a Linux kernel with a bug that throttled containers even when they were well under their limit.

   Root cause

   Software defect

   Component

   Container CPU limitLinux kernelNode operating system image

   Contributing factor

   Unpatched known bugUnverified assumption

   Detection

   While reviewing the container throttling metric, the team noticed many containers being throttled even though their CPU usage stayed far below their limits.

   Remediation

   • removed CPU limits from all services directly or indirectly on the users' critical path
   • moved those services to dedicated tainted nodes and gave them matching tolerations
   • set each service's CPU request to its peak usage over a few months plus a margin of more than 20%, and set memory requests the same way

   Action items

   • Move nodes to a kernel that contains the CFS throttling fix (4.19 or later), which for Buffer means a kops version whose host image is Ubuntu 20.04
   • After the kernel upgrade, check whether throttling is fully gone and update the post

   Lessons

   A CPU limit can slow a service down even when the service uses a small part of it, because of how the kernel enforces CFS quota on older kernels; the throttling metric shows it, the CPU usage graph does not. Upgrading the kernel is the safer fix. Removing limits works for latency, but only together with honest CPU and memory requests, isolation of the unbounded services, and monitoring of node usage, since unbounded containers can starve the kubelet.

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2. IL-0056 Calls from EKS pods to services behind an NLB in another VPC failed intermittently because the AWS VPC CNI did source NAT on the node

   MindTickle2020

   Symptoms

   On the Saturday the production cluster was moved from kops to EKS, the platform became very slow and too unstable to keep running, and the team reverted.

   Intermittent connection failuresHigh latency

   Trigger

   Production was moved from a kops cluster using Weave networking to a new EKS cluster using the AWS VPC CNI, without external SNAT enabled.

   Root cause

   DNS or network fault

   Component

   AWS VPC CNI

   Contributing factor

   Unreviewed defaultsUnverified assumption

   Detection

   The team lead saw the platform behaving very slowly after the switch to EKS and phoned the author.

   Remediation

   • reverted production to the kops cluster
   • set AWS_VPC_K8S_CNI_EXTERNALSNAT=true in the AWS VPC CNI

   Action items

   • Monitor and alert on the AWS VPC CNI

   Lessons

   In a networking problem every component in the stack is a suspect; ruling out EKS early cost a lot of time. A DaemonSet that pinged every component from every other one exposed the anomaly that led to the fix. The team had only skimmed the AWS CNI documentation before the migration; knowing how the plugin works internally would have led to better judgements and hypotheses while debugging.

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3. IL-0196 Adding a second Redis replica and lowering memory limits in one RedisFailover change restarted the only Redis pod that held data, and Sentinel promoted the empty new replica, erasing the data

   Palark2020

   Symptoms

   Right after an updated RedisFailover resource was rolled out, the large Redis database lost all its data and the service went down; the data had to be restored from a backup taken just before the change.

   Data lossService outage

   Trigger

   A RedisFailover change that raised the number of Redis replicas from one to two and, in the same rollout, lowered the containers' memory requests and limits from 22 GB to 19 GB.

   Root cause

   Software defect

   Component

   Application databasePersistent volumes and stateful setsContainer memory limit

   Contributing factor

   No staged rolloutSingle point of failureUnverified assumption

   Remediation

   • restored the Redis data from the backup prepared before the rollout

   Action items

   • Report the readiness probe flaw to the Redis Operator project and test the developers' fix
   • Reconsider the use of the Spotahome Redis Operator
   • Clean up the Redis databases and fix the application code that created the excess keys
   • Consider Redis built-in clustering and sharding

   Lessons

   Changing the replica count and the pod resources in one rollout turned a seemingly harmless change into a rolling restart of the only pod with data while the new replica was still empty. A readiness probe that only checks that Redis answers a ping does not tell whether a replica has finished syncing. Operators for critical stateful components need to be evaluated for maturity before production use, and the dump.rdb file should be backed up before any change to the Redis cluster.

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4. IL-0193 A GCP persistent disk degradation took down a Cassandra StatefulSet whose OrderedReady policy blocked recovery, and Metrictank could not reconnect to the recreated pods, causing a 23-hour Graphite query outage

   Grafana Labs2019

   Symptoms

   An alert fired because some Metrictank instances could not drain their write queue, which meant they could not write to Cassandra. Google had not yet published an incident, but a team member's Discord server, also hosted on GCP, was down, which pointed at GCP; Google confirmed an SSD persistent disk incident about 90 minutes after it began.

   High error rateNode NotReadyPods PendingService outage

   Trigger

   A Google Cloud incident in which SSD persistent disks performed so poorly that many I/O operations failed for an extended period.

   Root cause

   Cloud provider outage

   Component

   Persistent volumes and stateful setsApplication databaseNode root disk

   Contributing factor

   Overlapping failuresUnpatched known bugUnverified assumption

   Detection

   An alert that Metrictank write instances could not flush their write queue to Cassandra. Error rates alone rose too slowly to notice quickly, because most queries were served from memory.

   Remediation

   • Added compute nodes hoping new nodes could attach the disks, which did not work
   • Deleted and recreated the Cassandra StatefulSet with an updated pod management policy, so all pods but one started
   • Raised Kafka topic retention to avoid data loss during the long downtime
   • Temporarily added nodes so Metrictank restarts were not slowed by CPU starvation
   • Restarted all Metrictank instances, which took more than 20 hours, so they connected to the new Cassandra IPs

   Action items

   • Re-instantiate the gocql connection in Metrictank when it is detected dead, so it reconnects even when all Cassandra IPs change
   • Fix the Metrictank write-queue deadlock by updating an internal data structure with atomics instead of a lock

   Lessons

   An OrderedReady StatefulSet cannot recover past a single pod whose volume will not attach; when every pod is down, the ordering that protects normal start-up blocks the whole cluster. A client that learns peer addresses only from live peers needs a way to go back to the service name when all peers are replaced at once. A long-tolerated bug with a config workaround can surface at the worst time; this one turned out to have a simple fix. Writing incoming data to a Kafka write-ahead log first meant all data could still be ingested after recovery, and Kafka on non-SSD disks escaped the disk incident. With both Metrictank bugs fixed, the team expects a similar event to take less than 3 hours to recover from instead of 23.

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5. IL-0034 A crashing stats agent sidecar marked every pod unready and the service mesh pulled all services out of traffic

   Airbnb2019

   Symptoms

   An operation to upgrade the stats agent in Kubernetes was announced in advance, with a warning that metrics might be unavailable to services for a few minutes. A few minutes later a reply came in saying that all of the sender's Kubernetes services seemed to be down.

   Probe failuresService outage

   Trigger

   A scheduled upgrade of the stats agent sidecar, during which the agent container crashed.

   Root cause

   Faulty deployment

   Component

   Telemetry agentService discovery

   Contributing factor

   Unverified assumptionExcessive blast radius

   Detection

   A reply to the operation announcement, a few minutes later, said that all of the sender's Kubernetes services appeared to be down.

   Action items

   • Mark logging, tracing and stats agent containers as non-critical and leave them out of the service mesh's pod readiness check

   Lessons

   Every container in a pod affects the pod's readiness, so each sidecar needs a deliberate decision about how its health should count. A sidecar that crashes is not ready even when it has no probes, and any logic that requires all containers to be ready will take the pod out of traffic.

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