Incident Library
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  • Component
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  • Contributing factor
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Cases21 cases

14 to 18 of 21

  1. Symptoms

    At 07:53 UTC on 2022-03-31 the rate of 50x errors on GitLab.com went up, and at 07:54 PagerDuty paged the engineer on call (EOC) about the rising error rate. Users saw slow pages and intermittent 50x error pages. The incident lists the Web, API, Git and Pages services as affected.

    Trigger

    A k8s-workloads/gitlab-com pipeline deployed merge request !1643, a GitLab chart bump that changed the port names of Kubernetes Services and Deployments (related to the Prometheus service and pod monitors), starting with the canary environment gprd-cny at 07:49 UTC.

    Root cause
    Component
    Contributing factor
    Detection

    A PagerDuty alert on the rising error rate paged the EOC at 07:54 UTC, one minute after the 50x errors went up. The engineer deploying the change noticed the errors and linked them to it.

    Remediation
    • drained the canary environment and re-enabled it after twenty minutes
    • cancelled the deployment jobs for clusters c and d before they started
    • drained gprd-us-east1-d in HAProxy and re-enabled it five minutes later
    • raised the minimum replica count above 100 (merge request !1650)
    • drained gprd-us-east1-c in HAProxy, deployed the change to it, and re-enabled it
    • reverted the minimum replica increase (merge request !1652)
    Action items
    • Implement graceful draining of a whole regional cluster
    • Create a Chatops command that puts PagerDuty into maintenance mode
    Lessons

    Renaming ports on Kubernetes Services and Deployments behind a GCP load balancer made the load balancer reconfigure, and requests were slow or timed out until the new configuration had fully applied, which took minutes. GitLab notes that alerting worked well. The follow-up work is a way to drain a whole regional cluster gracefully and a Chatops command to put PagerDuty into maintenance mode.

  2. Symptoms

    In newly created AKS clusters using Azure CNI in Central India, kubectl exec and kubectl logs could time out, and pod-to-pod or pod-to-node traffic could time out. The cluster diagnostics page showed tunnel exec issues. Clusters using kubenet were not affected.

    Trigger

    VMs in Central India started being assigned MAC addresses in a much higher range than before (06 prefix rather than the usual 00).

    Root cause
    Component
    Contributing factor
    –
    Remediation
    • told owners of affected scale-set clusters to run a node image upgrade, or any Kubernetes upgrade such as a patch version, to get the Azure CNI that does not use a bridge
    • told owners of availability-set clusters to scale out and delete the VMs with a high-range MAC address in bridge mode
    • advised recreating affected clusters that were brand new
    Action items
    • Roll out a hotfix that makes transparent mode the default in all regions
    Lessons

    A change in how the platform assigns MAC addresses can wake a long-dormant bug in the network plugin. Knowing which CNI mode the nodes run (bridge or transparent) and keeping node images current decides whether such a bug reaches you.

  3. Symptoms

    About a minute after the etcd leader changed, two replicas of the Cortex distributor started logging "context deadline exceeded" when they tried to read keys from etcd. Writes from some customers that landed on those two replicas failed, while the other distributor replicas kept working, so the service saw an error rate of about 20% on writes to the London region of Hosted Prometheus.

    Trigger

    A scheduled Kubernetes version upgrade abruptly terminated the node that ran the etcd leader at 11:19:00 UTC.

    Root cause
    Component
    Contributing factor
    Detection

    An SLO-based alert paged the on-call engineer at 11:31, 11 minutes after the errors started. At a 20% error rate the monthly SLA would have taken about 18 hours to breach.

    Remediation
    • Restarted the two affected Cortex distributor replicas at 11:32, which stopped the errors
    Action items
    • Enable gRPC keepalive probes in the Cortex etcd client (DialKeepAliveTime 10s, DialKeepAliveTimeout, PermitWithoutStream)
    • Make the Kubernetes upgrade process terminate pods and machines gracefully, including the etcd pods managed by the etcd operator
    Lessons

    When a node dies abruptly, clients holding TCP connections to it are not told; without keepalive probes an etcd client can keep sending requests into a dead connection long after a new leader exists. A failover that works on the server side still needs clients that detect the dead peer. Node replacement during cluster upgrades should drain pods gracefully, including pods owned by operators that the upgrade scripts do not know about, and should give instances enough time to shut down.

  4. Symptoms

    For about six months, applications on Omio's Google Kubernetes Engine clusters stalled at random: they got stuck, stopped answering health check requests or lost network connections, and nothing the team looked at explained why.

    Trigger

    Multi-threaded workloads running with CPU limits on nodes whose kernel did not yet have the fix for a known CFS quota bug that causes unnecessary throttling.

    Root cause
    Component
    Contributing factor
    Detection

    Months of random stalls and failed health checks led the team to read the cgroup cpu.stat throttling counters inside the pods, which showed far more throttling than the limits should allow.

    Remediation
    • removed CPU limits until the kernel with the CFS bug fix was deployed across all clusters
    Action items
    • Deploy the kernel with the CFS quota bug fix across all clusters
    • Monitor utilisation, saturation and error metrics, API latency and error rates to confirm the change behaves as expected
    Lessons

    A CPU limit is a time quota per 100 ms period, not a share of cores, so a multi-threaded container can be stopped for most of each period long before it uses the cores it was given, and a kernel bug can make that worse. Throttling is invisible in standard Kubernetes metrics and has to be read from the cgroup counters. Removing limits trades away protection against a container that takes a whole node, which is only acceptable when runtimes are tuned.

  5. Symptoms

    On May 10 the latency graphs of several services showed a few spikes of up to about one second, then latency climbed to five seconds and then to 20 seconds, and it stayed there for a long time. The same pattern appeared on many services, not just one.

    Trigger

    Several services sent a high volume of external DNS queries, all of which went through kube-dns.

    Root cause
    Component
    Contributing factor
    Detection

    Latency graphs of several services showed the rise; engineers then looked at load per kube-dns pod.

    Lessons

    By default a pod discovers DNS through the kube-dns cluster IP and uses the ClusterFirst policy, so even external lookups go through kube-dns. If a pod does not need cluster DNS, set its dnsPolicy to Default or None. Check the DNS policy early and often. iptables picks backends at random and is not a load balancer, so pods behind a cluster IP, kube-dns included, can carry very different loads.

Check your cluster for this

These 21 cases involve Linux kernel and kubelet. kubegap audits a Kubernetes cluster for gaps like these, read-only, from Claude Code or Codex; its checks cite public reports like the ones in this library.

By root cause7

Configuration change3 cases

  1. IL-0179 With DEBUG logging and synchronous log output, a high-traffic service filled the 64 KB stdout pipe, so request threads blocked in write() while holding database connections and HikariCP ran dry, failing requests in 30-second bursts
  2. IL-0208 A GitLab chart bump that renamed Kubernetes Service and Deployment ports made the GCP load balancer reconfigure, and GitLab.com slowed down and returned intermittent 50x errors
    GitLab2022
  3. IL-0035 Worker nodes went NotReady after a new ElastAlert rule without memory limits used up node memory
    NU.nl2019

Faulty deployment1 case

Organisation
  1. IL-0136 A deployment that cleared an internal service's caches at peak traffic sent 20 times the normal load to the Azure OpenAI metadata backend in Sweden Central, and health checks that depended on its database restarted instances in a loop for almost six hours

Capacity exhaustion5 cases

  1. IL-0155 Some DOKS clusters in NYC1 saw intermittent DNS timeouts and NodeNotReady events because CoreDNS ran on shared-CPU Droplet worker nodes
  2. IL-0048 DNS lookups timed out in a large EKS cluster when CoreDNS hit the 1024 packets-per-second link-local limit, driven by sudo hostname lookups
  3. IL-0080 kube-dns on Mercari's GKE clusters could not keep up with peak-hour DNS query rates, and a Sev1 production outage followed when several services failed DNS resolution
  4. IL-0169 The Scaleway Kubernetes API in FR-PAR ran out of memory under simultaneous deployments, and because it also handled node authentication, Kapsule and Kosmos nodes went NotReady
  5. IL-0033 Uneven load across kube-dns pods and a DNS packets-per-second limit pushed service latency to 20 seconds
    Airbnb2019

Breaking change in an upgrade1 case

Component
Contributing factor
–
Organisation
  1. IL-0201 A framework upgrade caused kernel panics in GitHub's Kubernetes infrastructure, and GitHub.com web and API requests, mostly for issues and pull requests, failed intermittently for about 16 hours
    GitHub2025

Software defect7 cases

  1. IL-0081 API requests timed out during deployment rollouts because the ingress-nginx enable-serial-reloads option held back endpoint updates while a long NGINX reload was running
    Cresta2025
  2. IL-0131 A new kind of GenerateContent request made Vertex AI prediction API servers segfault, and once enough of them restarted at the same time the serving fleet could not carry the load
  3. IL-0161 A faulty earlier API update made new LKE cluster provisioning in Toronto time out for three days, leaving clusters with no node pools or the wrong number of nodes
    Linode2024
  4. IL-0112 The daily node rollover put DFDS's EKS nodes on an AMI later recalled for a kernel issue, causing "PLEG is not healthy" NodeNotReady flaps and pod network timeouts
    DFDS2022
  5. IL-0146 New AKS clusters with Azure CNI in Central India lost tunnel connectivity because VMs began getting MAC addresses with a 06 prefix, which exposed a dormant bug in bridge-mode Azure CNI
  6. IL-0190 Cortex distributors kept a stuck connection to a dead etcd leader after a Kubernetes upgrade terminated its node, failing writes to Hosted Prometheus for 12 minutes
  7. IL-0012 CPU limits and an unpatched kernel CFS quota bug throttled multi-threaded services into stalls, failed health checks and timeouts
    Omio2020

DNS or network fault3 cases

  1. IL-0178 On EKS, HPA scale-in returned 502 errors because containers stopped before their pod IPs left the Service endpoints, and after blue/green switches conntrack kept sending established connections to deleted pods behind an instance-mode ALB
  2. IL-0057 Higher p99 latency after moving a reverse proxy to EKS, from outgoing connections delayed by a SNAT conntrack race
    Prezi2019
  3. IL-0047 Pod-to-pod requests delayed by 5, 10 or 15 seconds because of DNS lookups lost to a conntrack race

Operator error1 case

Organisation
  1. IL-0115 One of OpenAI's three production AKS clusters went offline through a human error, and rebuilding it took 10½ hours because an AKS Kubernetes upgrade broke the ingress and AKS cannot be downgraded
    OpenAI2022